Simulation of example survival data | Simulating a Multistate dataset with three state: | Application on the EBMT dataset
Package: dscoreMSM 0.1.0
dscoreMSM: Survival Proximity Score Matching in Multi-State Survival Model
Implements survival proximity score matching in multi-state survival models. Includes tools for simulating survival data and estimating transition-specific coxph models with frailty terms. The primary methodological work on multistate censored data modeling using propensity score matching has been published by Bhattacharjee et al.(2024) <doi:10.1038/s41598-024-54149-y>.
Authors:
dscoreMSM_0.1.0.tar.gz
dscoreMSM_0.1.0.zip(r-4.7)dscoreMSM_0.1.0.zip(r-4.6)dscoreMSM_0.1.0.zip(r-4.5)
dscoreMSM_0.1.0.tgz(r-4.6-any)dscoreMSM_0.1.0.tgz(r-4.5-any)
dscoreMSM_0.1.0.tar.gz(r-4.7-any)dscoreMSM_0.1.0.tar.gz(r-4.6-any)
dscoreMSM_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
dscoreMSM/json (API)
| # Install 'dscoreMSM' in R: |
| install.packages('dscoreMSM', repos = c('https://atanubhattacharjee.r-universe.dev', 'https://cloud.r-project.org')) |
Uses libs:
- jags– Just Another Gibbs Sampler for Bayesian MCMC - binary JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS. JAGS was written with three aims in mind: * To have an engine for the BUGS language that runs on Unix * To be extensible, allowing users to write their own functions, distributions and samplers. * To be a plaftorm for experimentation with ideas in Bayesian modelling This package contains the 'jags' binary as well as the associated shared library modules loaded by the binary.
- c++– GNU Standard C++ Library v3
Datasets:
- EBMTdata - European Bone Marrow Transplantation data obtained from 'mstate' r package
- EBMTupdate - European Bone Marrow Transplantation data obtained from 'mstate' r package. This is the updated data obtained after applying SPSM.
- simulated_data - Simulated multistate data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:57afab2d9f. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 177 | ||
| source / vignettes | OK | 227 | ||
| linux-release-x86_64 | OK | 194 | ||
| macos-release-arm64 | OK | 103 | ||
| macos-oldrel-arm64 | OK | 134 | ||
| windows-devel | OK | 144 | ||
| windows-release | OK | 114 | ||
| windows-oldrel | OK | 115 | ||
| wasm-release | OK | 136 |
Exports:cphGMdscoreggplot_rocggplot_survsimfdata
Dependencies:backportsbase64encbslibcachemcheckmatecliclustercmprskcodacodetoolscolorspacecpp11data.tablediagramdigestdoParallelevaluatefarverfastmapfontawesomeforeachforeignFormulafsfuturefuture.applyggplot2glmnetglobalsgluegridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsisobanditeratorsjquerylibjsonliteKernSmoothknitrlabelinglatticelavalifecyclelistenvmagrittrMASSMatrixMatrixModelsmemoisemetsmimemstatemultcompmvtnormnlmennetnumDerivparallellypecplotrixpolsplineprodlimprogressrPublishquantregR6rangerrappdirsRColorBrewerRcppRcppArmadilloRcppEigenriskRegressionrjagsrlangrmarkdownrmsrpartrstudioapiS7sandwichsassscalesshapeSparseMSQUAREMstringistringrsurvivalTH.datatimeregtimeROCtinytexvctrsviridisLitewithrxfunyamlzoo
