Package: highMLR 1.0.1

highMLR: Machine Learning Feature Selection for High Dimensional Survival Data

A unified, flexible framework for high dimensional feature selection in the presence of a survival outcome. Provides multiple machine learning approaches (Cox elastic net, random survival forest, accelerated oblique random survival forest, gradient-boosted Cox, stability selection, classical univariate Cox screening, pseudo- observation bridging to arbitrary regression learners, and Fine-Gray competing risks selection) under a single interface. Adds causal survival forest estimation of heterogeneous treatment effects on survival (experimental), conformal survival prediction with finite- sample coverage guarantees, and time-dependent 'SHAP' explanations via 'SurvSHAP(t)'. Methodology is based on regularised Cox regression (2011) <doi:10.18637/jss.v039.i05>, random survival forests (2008) <doi:10.1214/08-AOAS169>, oblique random survival forests (2024) <doi:10.1080/10618600.2023.2231048>, stability selection (2010) <doi:10.1111/j.1467-9868.2010.00740.x>, causal survival forests (2023) <doi:10.1111/rssb.12538>, time-dependent survival explanations (2023) <doi:10.1016/j.knosys.2022.110234>, conformal survival prediction (2023) <doi:10.1093/biomet/asad043>, the Fine-Gray model for competing risks (1999) <doi:10.1080/01621459.1999.10474144>, and pseudo-observation regression (2010) <doi:10.1177/0962280209105020>.

Authors:Atanu Bhattacharjee [aut, cre]

highMLR_1.0.1.tar.gz
highMLR_1.0.1.zip(r-4.7)highMLR_1.0.1.zip(r-4.6)highMLR_1.0.1.zip(r-4.5)
highMLR_1.0.1.tgz(r-4.6-any)highMLR_1.0.1.tgz(r-4.5-any)
highMLR_1.0.1.tar.gz(r-4.7-any)highMLR_1.0.1.tar.gz(r-4.6-any)
highMLR_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
highMLR/json (API)
NEWS

# Install 'highMLR' in R:
install.packages('highMLR', repos = c('https://atanubhattacharjee.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • hnscc - High dimensional head and neck cancer survival and gene expression data
  • srdata - High dimensional protein gene expression survival data

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.70 score 5 scripts 255 downloads 8 exports 117 dependencies

Last updated from:80aa21d0f9. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK165
source / vignettesOK223
linux-release-x86_64OK171
macos-release-arm64OK84
macos-oldrel-arm64OK73
windows-develOK93
windows-releaseOK98
windows-oldrelOK87
wasm-releaseOK147

Exports:highmlrhighmlr_causalhighmlr_comparehighmlr_conformalhighmlr_explainhighmlr_reporthighmlr_screenhighmlr_stability

Dependencies:aorsfbackportsbase64encbslibcachemcheckmatecliclustercmprskcodetoolscollapsecolorspacecpp11DALEXdata.tablediagramDiceKrigingdigestdoFuturedoParallelevaluatefarverfastmapfontawesomeforeachforeignFormulafsfuturefuture.applyggplot2glmnetglobalsgluegrfgridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsiBreakDowningredientsisobanditeratorsjquerylibjsonlitekernelshapKernSmoothknitrlabelinglatticelavalifecyclelistenvlmtestmagrittrMASSMatrixMatrixModelsmemoisemetsmimemultcompmvtnormnlmennetnumDerivparallellypatchworkpecpillarpkgconfigplotrixpolsplineprodlimprogressrPublishquantregR6rangerrappdirsRColorBrewerRcppRcppArmadilloRcppEigenriskRegressionrlangrmarkdownrmsrpartrstudioapiS7sandwichsassscalesshapeSparseMSQUAREMstabsstringistringrsurvexsurvivalTH.datatibbletimeregtinytexutf8vctrsviridisLitewithrxfunxgboostyamlzoo

Getting started with highMLR

Rendered fromhighMLR.Rmdusingknitr::rmarkdownon May 23 2026.

Last update: 2026-05-23
Started: 2026-05-23