Package: afthd 1.1.0

afthd: Accelerated Failure Time for High Dimensional Data with MCMC

Functions for Posterior estimates of Accelerated Failure Time(AFT) model with MCMC and Maximum likelihood estimates of AFT model without MCMC for univariate and multivariate analysis in high dimensional gene expression data are available in this 'afthd' package. AFT model with Bayesian framework for multivariate in high dimensional data has been proposed by Prabhash et al.(2016) <doi:10.21307/stattrans-2016-046>.

Authors:Atanu Bhattacharjee [aut, cre, ctb], Gajendra Kumar Vishwakarma [aut, ctb], Pragya Kumari [aut, ctb]

afthd_1.1.0.tar.gz
afthd_1.1.0.zip(r-4.7)afthd_1.1.0.zip(r-4.6)afthd_1.1.0.zip(r-4.5)
afthd_1.1.0.tgz(r-4.6-any)afthd_1.1.0.tgz(r-4.5-any)
afthd_1.1.0.tar.gz(r-4.7-any)afthd_1.1.0.tar.gz(r-4.6-any)
afthd_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
afthd/json (API)

# Install 'afthd' in R:
install.packages('afthd', repos = c('https://atanubhattacharjee.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC - binary JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS. JAGS was written with three aims in mind: * To have an engine for the BUGS language that runs on Unix * To be extensible, allowing users to write their own functions, distributions and samplers. * To be a plaftorm for experimentation with ideas in Bayesian modelling This package contains the 'jags' binary as well as the associated shared library modules loaded by the binary.
  • c++– GNU Standard C++ Library v3
Datasets:
  • hdata - Head and neck cancer data

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

jagscpp

1.48 score 1 packages 7 scripts 304 downloads 14 exports 57 dependencies

Last updated from:5ec629860e. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK187
source / vignettesOK207
linux-release-x86_64OK174
macos-release-arm64OK135
macos-oldrel-arm64OK111
windows-develOK151
windows-releaseOK205
windows-oldrelOK152
wasm-releaseOK130

Exports:aftbybmvlgnbymvlgnbyunilgstbymvlgstbyunipvaftrglaftrglwbysmrglwbysuwbyAgmvwbyscrkmwbyscrkuwbysmvwbysuni

Dependencies:abindbbmlebdsmatrixbitopsbootcaToolsclicodacodetoolscpp11dplyrfastGHQuadforeachgenericsglmnetglueiteratorslatticelifecyclelsodalubridatemagrittrMASSMatrixmgcvmvtnormnlmenumDerivphotobiologypillarpkgconfigplyrpolynompurrrR2jagsR2WinBUGSR6RcppRcppArmadilloRcppEigenrjagsrlangrstpm2shapesplus2RstringistringrSunCalcMeeussurvivaltibbletidyrtidyselecttimechangeutf8vctrswithrzoo